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Publications

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(# Co-first author; * Corresponding author)

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​Selected Publications

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  1. Bi, A.#, Xu, D.#, Kang, L., Guo, Y., Song, X., Zhao, X., Zhang, J., Zhang, Z., Li, Y., Yin, C., Wang, J., and Lu, F. (2023). An integrated map of genetic variation from 1,062 wheat genomes. bioRxiv: 2023.03.31.535022. (#Co-first author, Ranked 1st)

  2. Bi, A.#, Wang, T.#, Wang, G., Zhang, L., Wassie, M., Amee, M., Xu, H., Hu, Z., Liu, A., Fu, J., et al. (2021). Stress memory gene FaHSP17.8-CII controls thermotolerance via remodeling PSII and ROS signaling in tall fescue. Plant Physiol. 187, 1163–1176. (IF: 8.005, #Co-first author, Ranked 1st)

  3. Wang, G.#, Bi, A.#, Amombo, E., Li, H., Zhang, L., Cheng, C., Hu, T., and Fu, J. (2017). Exogenous calcium enhances the photosystem II photochemistry response in salt stressed tall fescue. Front. Plant Sci. 8, 2032. (IF: 6.627, #Co-first author, Ranked 2nd)

  4. Bi, A., Fan, J., Hu, Z., Wang, G., Amombo, E., Fu, J., and Hu, T. (2016). Differential acclimation of enzymatic antioxidant metabolism and photosystem II photochemistry in tall fescue under drought and heat and the combined stresses. Front. Plant Sci. 7, 453. (IF: 6.627, Ranked 1st)

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Co-author Publications 

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  1. Zhou, Y.#, Zhao, X.#, Li, Y., Xu, J., Bi, A., Kang, L., Xu, D., Chen, H., Wang, Y., Wang, Y., et al. (2020). Triticum population sequencing provides insights into wheat adaptation. Nat. Genet. 52, 1412–1422. (IF: 41.38, Co-author, Ranked 5th)

  2. Zhao, X.#, Guo, Y.#, Kang, L., Yin, C., Bi, A., Xu, D., Zhang, Z., Zhang, J., Yang, X., Xu, J., et al. (2023). Population genomics unravels the Holocene history of bread wheat and its relatives. Nat. Plants 9, 403–419. (IF: 15.79, Co-author, Ranked 5th)

  3. Liu, Y.#, Shen, K.#, Yin, C.#, Xu, X.#, Yu, X., Ye, B., Sun, Z., Dong, J., Bi, A., Zhao, X., et al. (2023). Genetic basis of geographical differentiation and breeding selection for wheat plant architecture traits. Genome Biol. 24, 114. (IF: 18.010, Co-author, Ranked 9th)

  4. Hu, T., Wang, T., Wang, G., Bi, A., Wassie, M., Xie, Y., Xu, H., and Chen, L. (2021). Overexpression of FaHSP17.8-CII improves cadmium accumulation and tolerance in tall fescue shoots by promoting chloroplast stability and photosynthetic electron transfer of PSII. J. Hazard. Mater. 417, 125932. (IF: 10.588, Co-author, Ranked 4th)

  5. Zhang, L., Wang, T., Wang, G., Bi, A., Wassie, M., Xie, Y., Cao, L., Xu, H., Fu, J., Chen, L., et al. (2021). Simultaneous gene editing of three homoeoalleles in self-incompatible allohexaploid grasses. J. Integr. Plant Biol. 63, 1410–1415. (IF: 9.106, Co-author, Ranked 4th)

  6. Hu, Z., Huang, X., Amombo, E., Liu, A., Fan, J., Bi, A., Ji, K., Xin, H., Chen, L., and Fu, J.

    (2020). The ethylene responsive factor CdERF1 from bermudagrass (Cynodon dactylon) positively regulates cold tolerance. Plant Sci. 294, 110432. (IF: 3.712, Co-author, Ranked 6th)

  7. Hu, L., Bi, A., Hu, Z., Amombo, E., Li, H., and Fu, J. (2018). Antioxidant metabolism, photosystem II, and fatty acid composition of two tall fescue genotypes with different heat tolerance under high temperature stress. Front. Plant Sci. 9, 1242. (IF: 6.627, Co-author, Ranked 2nd)

  8. Hu, Z., Liu, A., Bi, A., Amombo, E., Gitau, M.M., Huang, X., Chen, L., and Fu, J. (2017). Identification of differentially expressed proteins in bermudagrass response to cold stress in the presence of ethylene. Environ. Exp. Bot. 139, 67–78. (IF: 6.028, Co-author, Ranked 3rd)

  9. Chen, L., Fan, J., Hu, Z., Huang, X., Amombo, E., Liu, A., Bi, A., Chen, K., Xie, Y., and Fu, J. (2017). Melatonin Is Involved in Regulation of Bermudagrass Growth and Development and Response to Low K+ Stress. Front. Plant Sci. 8, 1–9. (IF: 6.627, Co-author, Ranked 7th)

  10. Hu, Z., Amombo, E., Gitau, M.M., Bi, A., Zhu, H., Zhang, L., Chen, L., and Fu, J. (2017b). Changes of antioxidant defense system and fatty acid composition in bermudagrass under chilling Stress. J. Am. Soc. Hortic. Sci. 142, 101–109. (IF: 1.74, Co-author, Ranked 4th)

  11. Liu, A., Hu, Z., Bi, A., Fan, J., Gitau, M.M., Amombo, E., Chen, L., and Fu, J. (2016). Photosynthesis, antioxidant system and gene expression of bermudagrass in response to low temperature and salt stress. Ecotoxicology 25, 1445–1457. (IF: 2.329, Co-author, Ranked 3rd)

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Software

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1. Superfast genotyper for whole-genome shotgun (WGS) sequencing data [HapScanner V1.0]

Copyright owner: Institute of genetics and developmental biology, Chinese Academy of Sciences; Fei Lu; Aoyue Bi; Xinyue Song

Completion Date of Development: 2020/10/01

Registration Number: 2021SR0960734

 

2. Superfast variant calling and genotyping software for whole genome shotgun (WGS) data [FastCall V1.0]

Copyright owner: Institute of genetics and developmental biology, Chinese Academy of Sciences; Fei Lu; Aoyue Bi; Yafei Guo; Xinyue Song
Completion Date of Development: 2020/10/01
Registration Number: 2021SR0960735

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Honors

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2021    Excellence Award for Summer Youth Academic Symposium, State Key Laboratory of Plant Cell and Chromosome                           Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences

2019    The BIO International Student Workshop, Nara Institute of Science and Technology

2018    Merit Student of University of Chinese Academy of Sciences
2017    Excellent Student of Jiangsu Province, Graduate Summer School of Modern Agriculture and Crop Science and Technology
2017    The Outstanding Graduate of Wuhan Education Center, Chinese Academy of Sciences

2016    Inaugural Postgraduate Student Forum at East Lake, Third Prize

2014    The Outstanding Graduate of Henan Normal University
2013    National Encouragement scholarship of Henan Normal University

2012    Merit Student of Henan Normal University

2011    Pacemaker to Merit Student of Henan Normal University

2011    Excellent Student Cadre of Henan Normal University

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Academic Conference

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2021    Excellence Award for Summer Youth Academic Symposium, Beijing, China.

            “Triticum population sequencing unveils evolution of mutation burden in polyploid wheat”.

            Aoyue Bi, Daxing Xu, Fei Lu


2019    The 10th National Conference on Wheat Genomics and Molecular Breeding, Yantai, China.

            “Adaptive Evolution of Wheat: Convergence within Divergence”.

            Yao Zhou, Xuebo Zhao, Yiwen Li, Jun Xu, Aoyue Bi, Jing Wang, Changbin Yin, Yuling Jiao, Fei Lu

 

2017    Functional Genomics toward Green Crops for Sustainable Agriculture, Wuhan, China.

            “Identifying deleterious mutations in maize”.

            Aoyue Bi, Fei Lu

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2016    National Congress of Plant Biology, Wuhan, China.

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